close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103044860Si:dkey-283b15.2. (604 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.643
RING1
Ring finger protein 1.
    
 0.643
eed
Embryonic ectoderm development.
    
 0.527
pcgf1
Polycomb group ring finger 1.
    
 0.442
LOC103025860
Polycomb group ring finger 5a.
    
 0.442
pcgf6
Polycomb group ring finger 6.
    
 0.442
bmi1
Bmi1 polycomb ring finger oncogene 1a.
    
 0.442
PCGF3
Polycomb group ring finger 3.
    
 0.442
LOC103034194
Bmi1 polycomb ring finger oncogene 1b.
    
 0.442
ENSAMXP00000052818
Polycomb group ring finger 5b.
    
 0.442
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.