Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC103040173Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (662 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
  
 0.789
galnt2
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.631
fam234b
Family with sequence similarity 234 member B.
      
 0.619
tm9sf3
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
  
 0.616
vps54
VPS54 subunit of GARP complex.
      
 0.594
ENSAMXP00000041370
Golgi integral membrane protein 4a.
      
 0.591
ENSAMXP00000050901
Golgi integral membrane protein 4a.
      
 0.591
Sptlc1
Serine palmitoyltransferase, long chain base subunit 1.
   
  
 0.544
tmem165
GDT1 family protein.
   
  
 0.542
sptssa
Serine palmitoyltransferase, small subunit A.
      
 0.535
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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