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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bcl9BCL9 transcription coactivator. (1594 aa)    
Predicted Functional Partners:
LOC103034575
Catenin, beta 2.
    
 0.951
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.951
LOC103036475
PHD-type domain-containing protein.
    
 0.891
lef1
Lymphoid enhancer-binding factor 1.
    
 0.825
W5KDJ8_ASTMX
Junction plakoglobin b.
    
 0.762
LOC103045821
Junction plakoglobin a.
    
 0.762
LOC103022374
Transcription factor 7 like 1b.
    
 0.740
tcf7l2
Transcription factor 7 like 2.
    
 0.740
W5L9B2_ASTMX
Transcription factor 7.
    
 0.708
uck1
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 0.547
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.