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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gorasp2Golgi reassembly stacking protein 2. (314 aa)    
Predicted Functional Partners:
blzf1
Basic leucine zipper nuclear factor 1.
   
 0.959
W5KKP9_ASTMX
Golgin A2.
    
 0.912
ENSAMXP00000043497
USO1 vesicle transport factor.
   
 0.906
ENSAMXP00000043531
Uncharacterized protein.
    
 0.863
sec23a
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.802
sec23b
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.802
ENSAMXP00000038669
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.795
rab2a
RAB2A, member RAS oncogene family.
   
 0.792
LOC103039156
SEC24 homolog B, COPII coat complex component.
   
 0.781
LOC103040517
SEC24 homolog A, COPII coat complex component.
   
 0.781
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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