gpank1 protein (Astyanax mexicanus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

gpank1

Uncharacterized protein. (403 aa)

Predicted Functional Partners:

aldh18a1

0.671

LOC103037029

0.655

c23h6orf47

0.576

abt1

0.560

Prrc2c

0.502

W5KWF1_ASTMX

0.502

utp4

0.493

mrps25

0.489

FAM110A

0.441

Nol8

0.420

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FAM110A	gpank1	ENSAMXP00000044858	ENSAMXP00000012931	Family with sequence similarity 110 member A.	Uncharacterized protein.	0.441
LOC103037029	gpank1	ENSAMXP00000045072	ENSAMXP00000012931	Uncharacterized protein.	Uncharacterized protein.	0.655
Nol8	gpank1	ENSAMXP00000041955	ENSAMXP00000012931	RRM domain-containing protein.	Uncharacterized protein.	0.420
Nol8	mrps25	ENSAMXP00000041955	ENSAMXP00000020484	RRM domain-containing protein.	Mitochondrial ribosomal protein S25.	0.420
Nol8	utp4	ENSAMXP00000041955	ENSAMXP00000020283	RRM domain-containing protein.	UTP4 small subunit processome component.	0.530
Prrc2c	gpank1	ENSAMXP00000005170	ENSAMXP00000012931	Proline-rich coiled-coil 2C.	Uncharacterized protein.	0.502
W5KWF1_ASTMX	gpank1	ENSAMXP00000011913	ENSAMXP00000012931	Proline-rich coiled-coil 2A.	Uncharacterized protein.	0.502
abt1	gpank1	ENSAMXP00000043795	ENSAMXP00000012931	Activator of basal transcription 1.	Uncharacterized protein.	0.560
abt1	utp4	ENSAMXP00000043795	ENSAMXP00000020283	Activator of basal transcription 1.	UTP4 small subunit processome component.	0.506
aldh18a1	gpank1	ENSAMXP00000013372	ENSAMXP00000012931	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Uncharacterized protein.	0.671
c23h6orf47	gpank1	ENSAMXP00000029848	ENSAMXP00000012931	Si:ch73-25f10.6.	Uncharacterized protein.	0.576
gpank1	FAM110A	ENSAMXP00000012931	ENSAMXP00000044858	Uncharacterized protein.	Family with sequence similarity 110 member A.	0.441
gpank1	LOC103037029	ENSAMXP00000012931	ENSAMXP00000045072	Uncharacterized protein.	Uncharacterized protein.	0.655
gpank1	Nol8	ENSAMXP00000012931	ENSAMXP00000041955	Uncharacterized protein.	RRM domain-containing protein.	0.420
gpank1	Prrc2c	ENSAMXP00000012931	ENSAMXP00000005170	Uncharacterized protein.	Proline-rich coiled-coil 2C.	0.502
gpank1	W5KWF1_ASTMX	ENSAMXP00000012931	ENSAMXP00000011913	Uncharacterized protein.	Proline-rich coiled-coil 2A.	0.502
gpank1	abt1	ENSAMXP00000012931	ENSAMXP00000043795	Uncharacterized protein.	Activator of basal transcription 1.	0.560
gpank1	aldh18a1	ENSAMXP00000012931	ENSAMXP00000013372	Uncharacterized protein.	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	0.671
gpank1	c23h6orf47	ENSAMXP00000012931	ENSAMXP00000029848	Uncharacterized protein.	Si:ch73-25f10.6.	0.576
gpank1	mrps25	ENSAMXP00000012931	ENSAMXP00000020484	Uncharacterized protein.	Mitochondrial ribosomal protein S25.	0.489