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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ift172Intraflagellar transport 172. (1749 aa)    
Predicted Functional Partners:
W5LCJ8_ASTMX
Intraflagellar transport 57 homolog (Chlamydomonas).
   
 0.994
W5L312_ASTMX
Intraflagellar transport 80 homolog (Chlamydomonas).
   
0.993
Ift81
Intraflagellar transport 81 homolog.
    
 0.992
ift88
Intraflagellar transport 88 homolog.
   
 0.992
cluap1
Clusterin associated protein 1.
    
 0.991
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.991
ift46
Intraflagellar transport 46 homolog (Chlamydomonas).
   
 0.987
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.986
ENSAMXP00000054563
Fleer.
   
 0.984
ttc26
Tetratricopeptide repeat domain 26.
    
 0.983
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.