ssb protein (Astyanax mexicanus) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

ssb

Small RNA binding exonuclease protection factor La. (405 aa)

Predicted Functional Partners:

ro60

0.820

zc3h15

0.769

cct8

0.735

snrpd2

0.725

snrpd3

0.706

nop58

0.679

W5K288_ASTMX

0.666

c1qbp

0.662

ilf2

0.636

LOC103026355

0.621

Your Current Organism:

Astyanax mexicanus

NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103026355	cct8	ENSAMXP00000018181	ENSAMXP00000036009	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.	Chaperonin containing TCP1, subunit 8 (theta).	0.404
LOC103026355	nop58	ENSAMXP00000018181	ENSAMXP00000053409	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.	NOP58 ribonucleoprotein homolog (yeast).	0.591
LOC103026355	ssb	ENSAMXP00000018181	ENSAMXP00000012958	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.	Small RNA binding exonuclease protection factor La.	0.621
LOC103026355	zc3h15	ENSAMXP00000018181	ENSAMXP00000048507	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.	Zinc finger CCCH-type containing 15.	0.476
W5K288_ASTMX	nop58	ENSAMXP00000001698	ENSAMXP00000053409	Nucleolin.	NOP58 ribonucleoprotein homolog (yeast).	0.830
W5K288_ASTMX	ro60	ENSAMXP00000001698	ENSAMXP00000002159	Nucleolin.	Ro60, Y RNA binding protein.	0.423
W5K288_ASTMX	ssb	ENSAMXP00000001698	ENSAMXP00000012958	Nucleolin.	Small RNA binding exonuclease protection factor La.	0.666
c1qbp	ssb	ENSAMXP00000016582	ENSAMXP00000012958	Complement component 1, q subcomponent binding protein.	Small RNA binding exonuclease protection factor La.	0.662
cct8	LOC103026355	ENSAMXP00000036009	ENSAMXP00000018181	Chaperonin containing TCP1, subunit 8 (theta).	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.	0.404
cct8	nop58	ENSAMXP00000036009	ENSAMXP00000053409	Chaperonin containing TCP1, subunit 8 (theta).	NOP58 ribonucleoprotein homolog (yeast).	0.571
cct8	ssb	ENSAMXP00000036009	ENSAMXP00000012958	Chaperonin containing TCP1, subunit 8 (theta).	Small RNA binding exonuclease protection factor La.	0.735
ilf2	ro60	ENSAMXP00000011211	ENSAMXP00000002159	Interleukin enhancer binding factor 2.	Ro60, Y RNA binding protein.	0.422
ilf2	snrpd2	ENSAMXP00000011211	ENSAMXP00000052377	Interleukin enhancer binding factor 2.	Small nuclear ribonucleoprotein Sm D2.	0.777
ilf2	snrpd3	ENSAMXP00000011211	ENSAMXP00000036274	Interleukin enhancer binding factor 2.	Small nuclear ribonucleoprotein Sm D3.	0.587
ilf2	ssb	ENSAMXP00000011211	ENSAMXP00000012958	Interleukin enhancer binding factor 2.	Small RNA binding exonuclease protection factor La.	0.636
nop58	LOC103026355	ENSAMXP00000053409	ENSAMXP00000018181	NOP58 ribonucleoprotein homolog (yeast).	Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily.	0.591
nop58	W5K288_ASTMX	ENSAMXP00000053409	ENSAMXP00000001698	NOP58 ribonucleoprotein homolog (yeast).	Nucleolin.	0.830
nop58	cct8	ENSAMXP00000053409	ENSAMXP00000036009	NOP58 ribonucleoprotein homolog (yeast).	Chaperonin containing TCP1, subunit 8 (theta).	0.571
nop58	ssb	ENSAMXP00000053409	ENSAMXP00000012958	NOP58 ribonucleoprotein homolog (yeast).	Small RNA binding exonuclease protection factor La.	0.679
nop58	zc3h15	ENSAMXP00000053409	ENSAMXP00000048507	NOP58 ribonucleoprotein homolog (yeast).	Zinc finger CCCH-type containing 15.	0.429