Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103037734Uncharacterized protein. (345 aa)    
Predicted Functional Partners:
slc10a7
Sodium/bile acid cotransporter; Does not show transport activity towards bile acids or steroid sulfates; Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family.
      
 0.642
Fabp6
DUF4585 domain-containing protein.
   
  
 0.620
otc
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
  
 0.589
LOC103029554
Uncharacterized protein.
      
 0.538
zfand1
Zinc finger, AN1-type domain 1.
      
 0.511
serpind1
Serpin peptidase inhibitor, clade D (heparin cofactor), member 1; Belongs to the serpin family.
   
    0.497
ENSAMXP00000035566
Uncharacterized protein.
   
  
 0.494
LOC103043413
Nuclear receptor subfamily 1, group H, member 5.
   
 
 0.487
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
   
 
 0.487
LOC103045468
Nuclear receptor subfamily 0, group B, member 2b.
      
 0.454
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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