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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103025159Kelch-like family member 41b. (609 aa)    
Predicted Functional Partners:
bbs1
Bardet-Biedl syndrome 1.
    
 0.880
bbs9
Bardet-Biedl syndrome 9.
   
 0.875
bbs4
Bardet-Biedl syndrome 4.
    
 0.868
bbs7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.866
bbs2
Bardet-Biedl syndrome 2 protein homolog.
    
 0.860
ttc8
Tetratricopeptide repeat domain 8.
   
 0.851
Lztfl1
Leucine zipper transcription factor-like 1.
   
 0.702
W5KW74_ASTMX
Sequestosome 1.
    
 0.589
Rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.587
W5KX87_ASTMX
Cullin 3a; Belongs to the cullin family.
    
 0.508
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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