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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5KZY3_ASTMXSH3 and multiple ankyrin repeat domains 2b. (1779 aa)    
Predicted Functional Partners:
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
    
 0.832
LOC103030493
Uncharacterized protein.
    
 0.732
LOC103027721
Discs, large (Drosophila) homolog-associated protein 4b.
    
 0.732
LOC103031631
Discs, large (Drosophila) homolog-associated protein 1a.
    
 0.714
dlgap2
Discs, large (Drosophila) homolog-associated protein 2a.
    
 0.714
LOC103026136
Discs, large (Drosophila) homolog-associated protein 2b.
    
 0.714
ENSAMXP00000048283
Discs, large (Drosophila) homolog-associated protein 1b.
    
 0.714
W5JXY3_ASTMX
Discs, large homolog 3 (Drosophila); Belongs to the MAGUK family.
   
 0.583
ENSAMXP00000045910
Discs, large homolog 4a (Drosophila); Belongs to the MAGUK family.
   
 0.583
LOC103021716
Discs, large homolog 1 (Drosophila); Belongs to the MAGUK family.
   
 0.583
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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