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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103035431Si:rp71-17i16.5; Belongs to the PI3/PI4-kinase family. (1085 aa)    
Predicted Functional Partners:
pik3r5
Phosphoinositide-3-kinase, regulatory subunit 5.
   
 0.997
LOC103037146
Phosphoinositide-3-kinase, regulatory subunit 6b.
    
 0.948
inpp5d
Inositol polyphosphate-5-phosphatase D.
   
 
 0.923
pip4k2a
Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a.
     
 0.921
pip4k2c
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.
     
 0.921
LOC103035282
Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b.
     
 0.921
W5JXQ1_ASTMX
Inositol polyphosphate phosphatase-like 1b.
   
 
 0.920
LOC103033963
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2a.
     
 0.904
inpp5e
Inositol polyphosphate-5-phosphatase E.
   
 
 0.904
LOC103035761
Guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide a.
     
 0.904
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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