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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5L0H6_ASTMXMyosin_tail_1 domain-containing protein. (258 aa)    
Predicted Functional Partners:
LOC103022703
Myosin, light chain 1, alkali; skeletal, fast.
   
 0.797
LOC103021650
Myosin, light chain 6, alkali, smooth muscle and non-muscle.
   
 0.566
LOC103026687
Myosin, light chain 4, alkali; atrial, embryonic.
   
 0.566
ENSAMXP00000039253
Uncharacterized protein.
   
 0.566
LOC103022187
Myosin, light chain 9a, regulatory.
   
 0.519
LOC103039566
Uncharacterized protein.
   
 0.519
ENSAMXP00000045035
Uncharacterized protein.
   
 0.519
LOC103045271
Myosin, light chain 9b, regulatory.
   
 0.519
W5LSN2_ASTMX
Uncharacterized protein.
   
 0.516
LOC103034677
Zgc:163073.
   
 0.516
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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