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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
broxBRO1 domain and CAAX motif containing. (413 aa)    
Predicted Functional Partners:
chmp5
Charged multivesicular body protein 5b.
    
 0.751
LOC103031885
Charged multivesicular body protein 5a.
    
 0.751
W5LRY3_ASTMX
Uncharacterized protein.
    
 0.751
ENSAMXP00000036673
Uncharacterized protein.
    
 0.751
LOC103026801
Charged multivesicular body protein 4Bb.
   
 0.718
LOC103043292
Charged multivesicular body protein 4Ba.
   
 0.718
ENSAMXP00000052193
Charged multivesicular body protein 4C.
   
 0.718
Tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.622
LOC103039392
Charged multivesicular body protein 6b.
    
 0.593
LOC103028714
Charged multivesicular body protein 6a.
    
 0.593
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.