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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc21aTetratricopeptide repeat domain 21A. (1314 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.989
IFT122
Intraflagellar transport 122.
  
 0.953
W5LPP4_ASTMX
WD repeat-containing protein 35.
   
 0.943
IFT43
Intraflagellar transport 43.
    
 0.938
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.933
Wdr19
WD repeat domain 19.
   
 0.926
ift74
Intraflagellar transport 74.
   
 0.813
Ift81
Intraflagellar transport 81 homolog.
     
 0.807
ift20
Intraflagellar transport 20 homolog (Chlamydomonas).
    
 0.805
W5L312_ASTMX
Intraflagellar transport 80 homolog (Chlamydomonas).
   
 0.776
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.