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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galnt8Polypeptide N-acetylgalactosaminyltransferase 8a, tandem duplicate 1; Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily. (604 aa)    
Predicted Functional Partners:
gcnt1
Uncharacterized protein.
     
 0.904
LOC103028114
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.903
c1galt1c1
C1GALT1-specific chaperone 1.
     
 0.704
LOC103043397
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
     
 0.683
LOC103039123
Uncharacterized protein.
     
 0.683
ENSAMXP00000043210
Uncharacterized protein.
     
 0.677
LOC103028920
Si:dkey-202e17.1.
     
 0.671
tcea1
Transcription elongation factor A (SII), 1.
      
 0.517
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.