close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdm7aLysine (K)-specific demethylase 7Ab. (884 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 0.748
ENSAMXP00000028914
Histone H3; Belongs to the histone H3 family.
   
 0.585
LOC103028202
Histone H3; Belongs to the histone H3 family.
   
 0.585
ENSAMXP00000040584
Histone H3; Belongs to the histone H3 family.
   
 0.585
ENSAMXP00000045875
Histone H3; Belongs to the histone H3 family.
   
 0.585
ENSAMXP00000048229
Uncharacterized protein.
   
 0.585
ENSAMXP00000048247
annotation not available
   
 0.585
LOC103028202-2
Histone H3.3.
   
 0.585
LOC103028202-3
Histone domain-containing protein.
   
 0.585
LOC103028202-4
Histone H3.3.
   
 0.585
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.