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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem201Transmembrane protein 201. (654 aa)    
Predicted Functional Partners:
LOC103024276
Si:ch211-183d21.3.
      
 0.580
LOC103047733
Serine/threonine-protein kinase SBK1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
      
 0.578
Sla2
Src-like-adaptor 2.
      
 0.568
COQ4
Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family.
      
 0.565
emd
Emerin (Emery-Dreifuss muscular dystrophy).
    
 
 0.553
eapp
E2f-associated phosphoprotein.
      
 0.540
W5KNM3_ASTMX
SUN domain-containing protein.
    
 
 0.531
ENSAMXP00000029807
SUN domain-containing protein.
    
 
 0.531
ENSAMXP00000050923
Si:dkey-92f12.2.
    
 
 0.531
thyn1
Thymocyte nuclear protein 1.
      
 0.517
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.