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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5L1S1_ASTMXLysine (K)-specific demethylase 6A, like. (1314 aa)    
Predicted Functional Partners:
Rbbp5
Retinoblastoma binding protein 5.
    
 0.967
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.962
atp5f1a
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 0.949
Atp5d
ATP synthase F1 subunit delta.
  
 0.943
atp5f1c
ATP synthase subunit gamma.
  
 0.928
atp5po
ATP synthase peripheral stalk subunit OSCP.
  
 0.924
Birc6
Baculoviral IAP repeat containing 6.
   
 0.922
ENSAMXP00000040314
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.922
eed
Embryonic ectoderm development.
   
 0.904
ENSAMXP00000028914
Histone H3; Belongs to the histone H3 family.
   
 0.899
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.