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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5L214_ASTMXNon-specific serine/threonine protein kinase. (713 aa)    
Predicted Functional Partners:
mapk1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.960
LOC103041389
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.960
W5KMM6_ASTMX
TSC complex subunit 1b.
    
 0.916
tsc1
TSC complex subunit 1a.
    
 0.916
LOC103040096
TBC1 domain family, member 7.
     
 0.912
atf4
Activating transcription factor 4a.
     
 0.905
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
     
  0.900
pkmyt1
Protein kinase, membrane associated tyrosine/threonine 1.
     
 
0.900
rint1
RAD50 interactor 1.
    
 0.791
Stx18
Syntaxin 18.
   
 0.780
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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