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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103037941Progestin and adipoQ receptor family member IIIb. (317 aa)    
Predicted Functional Partners:
adipoq
Adiponectin, C1Q and collagen domain containing, b.
     
 0.626
W5K0G8_ASTMX
Raf-1 proto-oncogene, serine/threonine kinase a.
    
  0.523
araf
A-Raf proto-oncogene, serine/threonine kinase.
    
  0.523
Braf
B-Raf proto-oncogene, serine/threonine kinase.
    
  0.523
LOC103027930
Raf-1 proto-oncogene, serine/threonine kinase b.
    
  0.523
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.458
ENSAMXP00000055082
Dual specificity phosphatase 19a.
      
 0.414
LOC103043145
Dual specificity phosphatase 19b; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
      
 0.410
dusp16
Dual specificity phosphatase 16.
      
 0.407
LOC103043231
GTP cyclohydrolase 2.
     
 0.404
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.