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Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLIP4CAP-Gly domain containing linker protein family member 4. (493 aa)    
Predicted Functional Partners:
Clip4
CAP-Gly domain-containing protein.
 
     
0.617
W5KT96_ASTMX
Cylindromatosis (turban tumor syndrome), like.
    
 0.570
cyld
Cylindromatosis (turban tumor syndrome), a; Belongs to the peptidase C19 family.
    
 0.570
W5LQN4_ASTMX
Uncharacterized protein.
    
 0.537
bub3
BUB3 mitotic checkpoint protein.
    
 0.500
ripk1
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
    
  0.487
W5LI45_ASTMX
Tumor necrosis factor receptor superfamily, member 1a.
    
  0.487
dctn2
Dynactin 2 (p50).
    
 
 0.457
LOC103037932
DNA (cytosine-5-)-methyltransferase 3 beta, duplicate b.2; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 
 0.445
LOC103035866
DNA (cytosine-5-)-methyltransferase 3 beta, duplicate a; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
 
 0.445
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.