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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103046010Synaptic vesicle glycoprotein 2Ca. (730 aa)    
Predicted Functional Partners:
W5KRQ0_ASTMX
Laminin, gamma 3.
     
 0.695
lamc1
Laminin, gamma 1.
     
 0.695
LOC103026996
Laminin, beta 1a.
     
 0.683
Lamb2
Laminin, beta 2 (laminin S).
     
 0.683
W5KNT0_ASTMX
Si:ch211-241e1.3.
     
 0.668
LOC103024927
Laminin, alpha 3.
     
 0.668
LOC103026945
Laminin, beta 1b.
     
 0.668
Lama2
Laminin_I domain-containing protein.
     
 0.650
ints9
Integrator complex subunit 9.
    
 0.530
Ints1
Integrator complex subunit 1.
    
 0.526
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.