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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5L2P3_ASTMXRadial spoke head component 4A. (518 aa)    
Predicted Functional Partners:
RSPH1
Radial spoke head component 1.
   
 
 0.956
LOC111190171
Radial spoke head 9 homolog.
  
 0.898
ENSAMXP00000033034
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.896
ENSAMXP00000042375
Uncharacterized protein.
   
 0.876
ENSAMXP00000039826
Uncharacterized protein.
  
 
 0.849
W5KZA4_ASTMX
Uncharacterized protein.
    
 0.839
Dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
   
  
 0.817
LOC103028563
Coiled-coil domain containing 114.
   
  
 0.786
LOC103033990
Radial spoke head 3.
  
 
 0.765
ENSAMXP00000027925
Uncharacterized protein.
  
 
 0.761
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.