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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103033660Cytochrome b561 family, member D2. (221 aa)    
Predicted Functional Partners:
Ints3
Integrator complex subunit 3.
   
   0.567
ints5
Integrator complex subunit 5.
   
   0.566
Ints1
Integrator complex subunit 1.
    
   0.560
nprl2
NPR2 like, GATOR1 complex subunit.
    
 0.454
tmem115
Transmembrane protein 115.
      
 0.443
W5LCJ2_ASTMX
Protein kinase C binding protein 1, like.
    
 
 0.434
zmynd8
Zinc finger, MYND-type containing 8.
    
 
 0.434
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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