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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grxcr1Glutaredoxin and cysteine rich domain containing 1 a. (297 aa)    
Predicted Functional Partners:
Cap1
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
   0.686
Cap2
Adenylyl cyclase-associated protein; Belongs to the CAP family.
    
   0.686
ENSAMXP00000029354
Uncharacterized protein.
     
 0.599
GRXCR2
Glutaredoxin and cysteine rich domain containing 2.
     
0.563
lmtk2
Lemur tyrosine kinase 2.
      
 0.520
W5KVG3_ASTMX
Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.464
Myo3a
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.464
Lcp1
Lymphocyte cytosolic protein 1 (L-plastin).
     
 0.461
W5L3X3_ASTMX
Plastin 3 (T isoform).
     
 0.461
W5LIK7_ASTMX
Plastin 1 (I isoform).
     
 0.461
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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