STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W5LHV8_ASTMXZgc:154055. (565 aa)    
Predicted Functional Partners:
mtmr6
Myotubularin related protein 6.
  
0.851
mtmr8
Myotubularin related protein 8.
  
0.840
mtmr7
Myotubularin related protein 7b.
  
0.833
ENSAMXP00000038950
Myotubularin related protein 7a.
  
0.832
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
   0.538
LOC103043091
Elastin microfibril interfacer 1a.
    
  0.513
ENSAMXP00000044530
Elastin microfibril interfacer 1b.
    
  0.513
ccm2
CCM2 scaffold protein.
   
 0.502
W5K1T1_ASTMX
Uncharacterized protein.
      
 0.499
Mtm1
Myotubularin 1.
  
 
0.423
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.