STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDK2AP1Cyclin dependent kinase 2 associated protein 1. (119 aa)    
Predicted Functional Partners:
LOC103022882
MBD domain-containing protein.
   
 
 0.619
MBD3
Methyl-CpG binding domain protein 3a.
   
 
 0.619
LOC103023991
Retinoblastoma binding protein 4, like.
   
 
 0.525
rbbp4
Retinoblastoma binding protein 4.
   
 
 0.525
Sez6l
Seizure related 6 homolog (mouse)-like.
      
 0.521
W5LLK2_ASTMX
Ras protein-specific guanine nucleotide-releasing factor 2a.
   
  
 0.474
mta2
Metastasis associated 1 family, member 2.
    
 
 0.455
mta1
Metastasis associated 1.
    
 
 0.455
LOC103047709
Metastasis associated 1 family, member 3.
    
 
 0.455
Wdr73
WD repeat domain 73.
   
 
 0.450
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.