STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mipepMitochondrial intermediate peptidase. (746 aa)    
Predicted Functional Partners:
Nts
Neurotensin.
    
 0.820
Fxn
Frataxin.
   
 
 0.595
Xpnpep3
X-prolyl aminopeptidase 3, mitochondrial.
   
 
 0.586
Pmpca
Peptidase (mitochondrial processing) alpha; Belongs to the peptidase M16 family.
   
  
 0.577
pitrm1
Pitrilysin metallopeptidase 1.
    
 
 0.574
dpp3
Dipeptidyl peptidase 3; Belongs to the peptidase M49 family.
   
  
 0.573
atp23
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
      
 0.565
RIMS2
Regulating synaptic membrane exocytosis 2.
    
   0.548
RIMS2-2
Regulating synaptic membrane exocytosis 2.
    
   0.548
Rplp0
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
  
 0.542
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.