STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAMXP00000038837Uncharacterized protein. (369 aa)    
Predicted Functional Partners:
Trip12
Thyroid hormone receptor interactor 12.
   
    0.696
ENSAMXP00000039594
Uncharacterized protein.
   
    0.696
fmr1
Fragile X mental retardation 1.
   
 
 0.666
fam98a
Family with sequence similarity 98 member A.
    
 
 0.641
g3bp2
Zgc:56304.
    
 
 0.585
g3bp1
GTPase activating protein (SH3 domain) binding protein 1.
    
 
 0.585
W5K751_ASTMX
Ataxin 2-like.
    
 
 0.572
LOC103039539
LsmAD domain-containing protein.
    
 
 0.572
LOC103037120
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.541
LOC103044136
DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.
   
 
 0.541
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.