STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hoxa2Homeobox domain-containing protein. (352 aa)    
Predicted Functional Partners:
LOC103029979
Homeobox B5b.
  
 
0.484
LOC111192049
Homeobox B5a.
  
 
0.481
snai2
Snail family zinc finger 2.
   
 
 0.446
LOC103040777
Pre-B-cell leukemia homeobox 2.
    
 0.438
pbx4
Pre-B-cell leukemia transcription factor 4.
    
 0.438
W5LJ61_ASTMX
Pre-B-cell leukemia homeobox 1a.
    
 0.438
ENSAMXP00000048965
Homeobox domain-containing protein.
    
 0.438
ENSAMXP00000051980
Homeobox domain-containing protein.
    
 0.438
LOC103029164
Homeobox domain-containing protein.
    
 0.438
LOC103023883
Homeobox A5a.
  
 
0.419
Your Current Organism:
Astyanax mexicanus
NCBI taxonomy Id: 7994
Other names: A. mexicanus, Mexican tetra, blind cave fish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.