Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108263498Zinc transporter ZIP1-like. (290 aa)    
Predicted Functional Partners:
slc39a11
Zinc transporter ZIP11 isoform X2.
   
 0.719
TOMM7
Mitochondrial import receptor subunit TOM7 homolog.
    
 
 0.710
LOC108269286
Sorting and assembly machinery component 50 homolog A.
    
 
 0.673
samm50
Sorting and assembly machinery component 50 homolog.
    
 
 0.673
slc30a6
Zinc transporter 6 isoform X1.
   
 
 0.662
slc39a7
Zinc transporter SLC39A7.
   
 0.645
phb
Prohibitin.
    
 
 0.604
slc39a4
Zinc transporter ZIP4.
   
 0.597
slc39a12
Zinc transporter ZIP12 isoform X1.
   
 0.597
slc39a13
Zinc transporter ZIP13 isoform X2.
   
 0.588
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.