Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC108263538Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (587 aa)    
Predicted Functional Partners:
LOC108279165
Platelet endothelial cell adhesion molecule-like.
    
  0.985
LOC108272629
Platelet endothelial cell adhesion molecule-like isoform X2.
    
  0.982
ctnnd1
Catenin delta-1 isoform X1.
   
  0.910
LOC108256494
Growth factor receptor-bound protein 2.
   
 0.893
grb2
Growth factor receptor-bound protein 2 isoform X1.
   
 0.893
pdgfrb
Platelet-derived growth factor receptor beta isoform X2; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.
   
 0.863
gab1
GRB2-associated-binding protein 1 isoform X4.
    
 0.862
gab2
GRB2-associated-binding protein 2 isoform X1.
    
 0.861
sos2
Son of sevenless homolog 2.
    
 0.845
sos1
Son of sevenless homolog 1.
    
 0.845
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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