Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCN3Protein NOV-like. (315 aa)    
Predicted Functional Partners:
syt12
Synaptotagmin-12 isoform X2.
      
 0.500
sparc
SPARC isoform X1.
   
  
 0.459
LOC108261332
Agrin-like.
   
  
 0.459
plagl2
Zinc finger protein PLAGL2.
      
 0.452
plag1
Zinc finger protein PLAG1.
      
 0.452
wnt1
Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family.
      
 0.445
prkdc
DNA-dependent protein kinase catalytic subunit; Belongs to the PI3/PI4-kinase family.
      
 0.444
igfbp7
Insulin-like growth factor-binding protein 7.
   
  
 0.401
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.