Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108269102Collectin-10-like. (246 aa)    
Predicted Functional Partners:
colec11
Collectin-11 isoform X1.
     
  0.656
LOC108265655
Collagen alpha-1(II) chain-like isoform X1.
  
 
 
0.612
LOC108263468
Complement C1r subcomponent-like; Belongs to the peptidase S1 family.
    
 0.603
LOC108268542
Mannan-binding lectin serine protease 2-like isoform X2; Belongs to the peptidase S1 family.
    
 0.603
masp1
Mannan-binding lectin serine protease 1 isoform X1; Belongs to the peptidase S1 family.
    
 0.603
LOC108268478
Complement C1r-B subcomponent-like; Belongs to the peptidase S1 family.
    
 0.603
LOC108268494
Mannan-binding lectin serine protease 2-like; Belongs to the peptidase S1 family.
    
 0.603
ENSIPUP00000013442
annotation not available
    
 0.603
masp2
Mannan-binding lectin serine protease 2; Belongs to the peptidase S1 family.
    
 0.603
pyroxd2
Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 isoform X2.
      
 0.585
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.