Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108262767Uncharacterized protein LOC108262767. (530 aa)    
Predicted Functional Partners:
kdm6b
Lysine-specific demethylase 6B.
   
 0.538
LOC108272609
Histone demethylase UTY-like isoform X1.
   
 0.538
LOC108277160
Lysine-specific demethylase 6B-like isoform X2.
   
 0.538
kdm6a
Lysine-specific demethylase 6A isoform X1.
   
 0.538
spi1
Transcription factor PU.1 isoform X1.
   
 0.491
mphosph8
M-phase phosphoprotein 8 isoform X1.
    
 0.485
socs3
Suppressor of cytokine signaling 3.
   
 0.485
LOC108274104
Suppressor of cytokine signaling 3-like.
   
 0.485
LOC108256494
Growth factor receptor-bound protein 2.
    
  0.459
grb2
Growth factor receptor-bound protein 2 isoform X1.
    
  0.459
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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