Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC108272311Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (614 aa)    
Predicted Functional Partners:
LOC108274586
Tyrosine 3-monooxygenase.
   
  
 0.936
nfatc2
Nuclear factor of activated T-cells, cytoplasmic 2 isoform X1.
      
 0.702
ddc
aromatic-L-amino-acid decarboxylase.
  
  
 0.697
prkn
Parkin RBR E3 ubiquitin protein ligase.
    
 
 0.655
dbh
Dopamine beta-hydroxylase isoform X1.
   
  
 0.632
LOC108279869
Tyrosine 3-monooxygenase-like.
   
  
 0.631
pitx3
Homeobox protein.
    
 
 0.615
pick1
PRKCA-binding protein.
    
 
 0.582
LOC108266753
Amine oxidase.
      
 0.581
LPCAT1
Lysophosphatidylcholine acyltransferase 1-like.
    
 
 0.557
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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