Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
adamts16A disintegrin and metalloproteinase with thrombospondin motifs 16. (1201 aa)    
Predicted Functional Partners:
gpr84
G-protein coupled receptor 84.
      
 0.702
sall4
Sal-like protein 4.
   
  
 0.691
arid4b
AT-rich interactive domain-containing protein 4B isoform X2.
    
 
 0.639
ush1c
Harmonin.
      
 0.629
selenos
Selenoprotein S.
      
 0.629
pofut2
GDP-fucose protein O-fucosyltransferase 2 isoform X2.
     
 0.553
morf4l1
Mortality factor 4-like protein 1.
    
 
 0.544
LOC108276393
Signal peptide, CUB and EGF-like domain-containing protein 3.
   
 0.532
scube2
Signal peptide, CUB and EGF-like domain-containing protein 2 isoform X8.
   
 0.532
scube1
Signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1.
   
 0.532
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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