Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC108264003B-cell CLL/lymphoma 9-like protein isoform X1. (1504 aa)    
Predicted Functional Partners:
foxr1
Forkhead box protein R1.
      
 0.855
LOC108265410
Transcription factor 7-like 1-B.
     
 0.747
tcf7l2
Transcription factor 7-like 2 isoform X2.
     
 0.747
lef1
Lymphoid enhancer-binding factor 1 isoform X1.
     
  0.724
tcf7
Transcription factor 7 isoform X6.
     
  0.724
upk2
Uroplakin-2.
      
 0.669
bcl9
B-cell CLL/lymphoma 9 protein isoform X1.
     
0.640
pygo1
Pygopus homolog 1.
     
 0.578
wdr5
WD repeat-containing protein 5.
     
  0.530
men1
Menin.
     
  0.530
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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