Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC108276018SH3 domain-containing protein 19-like. (836 aa)    
Predicted Functional Partners:
sh3yl1
SH3 domain-containing YSC84-like protein 1.
    
   0.858
ficd
Adenosine monophosphate-protein transferase FICD.
      
 0.641
pum1
Pumilio homolog 1 isoform X1.
     
  0.615
LOC108279100
Clathrin interactor 1-like isoform X1.
     
 0.586
clint1
Clathrin interactor 1 isoform X2.
     
 0.586
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
  0.580
chm4c
Charged multivesicular body protein 4C.
    
  0.544
LOC108272732
Charged multivesicular body protein 4b.
    
  0.544
LOC108265407
Charged multivesicular body protein 4b.
    
  0.544
snf8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
     
  0.540
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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