Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cbarpVoltage-dependent calcium channel beta subunit-associated regulatory protein isoform X2. (874 aa)    
Predicted Functional Partners:
cadps
Calcium-dependent secretion activator 1 isoform X6.
      
 0.700
clrn3
Clarin-3.
      
 0.659
snap47
Synaptosomal-associated protein 47.
   
  
 0.638
LOC108258317
Voltage-dependent T-type calcium channel subunit alpha-1H-like.
      
 0.628
ghitm
Growth hormone-inducible Transmembrane protein; Belongs to the BI1 family.
      
 0.628
cacna1h
Voltage-dependent T-type calcium channel subunit alpha-1H.
      
 0.628
cplx3
Complexin-3.
      
 0.625
shoc2
Leucine-rich repeat protein SHOC-2.
    
   0.583
LOC108259070
Regulating synaptic membrane exocytosis protein 1-like isoform X7.
   
  
 0.559
borcs6
Uncharacterized protein C17orf59 homolog isoform X1.
      
 0.489
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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