Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSIPUP00000001039Tachykinin precursor 4. (96 aa)    
Predicted Functional Partners:
tacr3
neuromedin-K receptor; Belongs to the G-protein coupled receptor 1 family.
      
 0.492
ENSIPUP00000013652
Si:ch1073-406l10.2.
  
     0.489
LOC108276280
Tachykinin-3-like.
      
 0.473
tacr2
substance-K receptor isoform X2; Belongs to the G-protein coupled receptor 1 family.
      
 0.473
LOC108256306
Uncharacterized protein LOC108256306.
  
     0.459
LOC108275426
CD59 glycoprotein-like.
  
     0.443
LOC108260923
E3 ubiquitin-protein ligase TRIM39-like.
  
     0.429
LOC108266832
OX-2 membrane glycoprotein-like.
  
     0.421
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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