Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ncam1Neural cell adhesion molecule 1 isoform X7. (794 aa)    
Predicted Functional Partners:
l1cam
Neural cell adhesion molecule L1 isoform X1.
   
0.938
LOC108275777
Neural cell adhesion molecule L1.1-like isoform X1.
   
0.938
LOC108277417
Neural cell adhesion molecule 1-like isoform X2.
  
  
0.902
ncam2
Neural cell adhesion molecule 2 isoform X1.
     
 
0.900
gfra1
GDNF family receptor alpha; Belongs to the GDNFR family.
     
 0.712
st8sia4
CMP-N-acetylneuraminate-poly-alpha-2, 8-sialyltransferase isoform X1; Belongs to the glycosyltransferase 29 family.
   
 
 0.674
gdnf
Glial cell line-derived neurotrophic factor.
    
 0.670
cntn2
Contactin-2.
   
 0.630
agrn
Agrin isoform X1.
     
 0.604
LOC108263696
GDNF family receptor alpha-1-like isoform X1.
     
 0.542
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.