Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
aspg60 kDa lysophospholipase isoform X3. (661 aa)    
Predicted Functional Partners:
tasp1
Threonine aspartase 1 isoform X2.
   
 
 0.707
LOC108263510
Isoaspartyl peptidase/L-asparaginase-like.
   
 
 0.654
asrgl1
Isoaspartyl peptidase/L-asparaginase.
   
 
 0.654
asns
Asparagine synthetase [glutamine-hydrolyzing].
      
 0.633
LOC108259036
Rho GTPase-activating protein 20-like.
      
 0.507
uric
Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. Belongs to the uricase family.
      
 0.492
LOC108267498
Cysteine and histidine-rich domain-containing protein 1-like.
      
 0.474
nags
N-acetylglutamate synthase, mitochondrial.
      
 0.471
ift81
Intraflagellar transport protein 81 homolog.
    
 0.432
traf7
E3 ubiquitin-protein ligase TRAF7.
    
 0.418
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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