Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108276021Endothelin B receptor-like; Belongs to the G-protein coupled receptor 1 family. (505 aa)    
Predicted Functional Partners:
edn1
Endothelin-1.
    
 0.998
LOC108255139
Endothelin-3-like isoform X2.
    
 0.992
LOC108272338
Endothelin-2-like.
     
 0.983
LOC108271202
Guanine nucleotide-binding protein subunit alpha-11.
   
 0.943
LOC108260018
Guanine Nucleotide-binding protein G(q) subunit alpha.
   
 0.943
LOC108280682
Guanine nucleotide-binding protein subunit alpha-11-like.
   
 0.943
LOC108274101
Endothelin-2-like isoform X1.
     
 0.925
LOC108273768
Guanine nucleotide-binding protein subunit alpha-13-like.
    
 0.916
LOC108278714
Guanine nucleotide-binding protein subunit alpha-13.
    
 0.916
gna12
Guanine nucleotide-binding protein subunit alpha-12.
    
 0.916
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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