Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
rasl11aRas-like protein family member 11A-like protein. (252 aa)    
Predicted Functional Partners:
LOC108255676
ADP-ribosylation factor 1-like; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.638
LOC108270845
Trafficking kinesin-binding protein 1-like.
    
 0.633
itsn2
LOW QUALITY PROTEIN: intersectin-2.
   
 0.597
ENSIPUP00000019729
annotation not available
   
 0.597
LOC108269989
Intersectin-2-like isoform X1.
   
 0.597
tsc2
Tuberin isoform X1.
    
 0.557
wdr13
WD repeat-containing protein 13 isoform X1.
    
 0.509
LOC108272036
Macrophage-stimulating protein receptor-like.
    
 0.466
met
Hepatocyte growth factor receptor isoform X1.
    
 0.466
mst1r
Macrophage-stimulating protein receptor.
    
 0.466
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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