Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb16Zinc finger and BTB domain-containing protein 16. (671 aa)    
Predicted Functional Partners:
dazl
Deleted in azoospermia-like isoform X2.
    
 
 0.754
ncor2
Nuclear receptor corepressor 2 isoform X2.
    
 0.739
ncor1
Nuclear receptor corepressor 1 isoform X16.
    
 0.739
rnaseh2a
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
      
 0.703
GRIN3A
Glutamate receptor ionotropic, NMDA 3A.
      
 0.700
dmrt1
Doublesex- and mab-3-related transcription factor 1 isoform X2.
    
 0.680
ar
Androgen receptor.
    
 0.657
runx1t1
Protein CBFA2T1 isoform X3.
   
 
 0.645
cbfa2t3
Protein CBFA2T3 isoform X1.
   
 
 0.645
LOC108279325
POU domain protein.
    
 0.644
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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