Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kiaa1324UPF0577 protein KIAA1324 homolog. (988 aa)    
Predicted Functional Partners:
msi1
RNA-binding protein Musashi homolog 1.
    
 
 0.560
hace1
E3 ubiquitin-protein ligase HACE1.
    
 0.466
LOC108273989
Cytochrome c oxidase assembly protein COX11, mitochondrial.
      
 0.444
arid4a
AT-rich interactive domain-containing protein 4A.
    
 0.438
arid4b
AT-rich interactive domain-containing protein 4B isoform X2.
    
 0.438
mysm1
Histone H2A deubiquitinase MYSM1.
    
 0.437
timp4
Metalloproteinase inhibitor 4.
     
 0.429
tmem9
Transmembrane protein 9 isoform X1.
    
 
 0.407
tmem9b
Transmembrane protein 9B.
    
 
 0.407
dennd5a
DENN domain-containing protein 5A isoform X1.
      
 0.406
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.