Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ramp1Receptor activity-modifying protein 1. (150 aa)    
Predicted Functional Partners:
LOC108266827
Calcitonin gene-related peptide type 1 receptor-like isoform X2; Belongs to the G-protein coupled receptor 2 family.
    
 0.995
calcrl
Calcitonin gene-related peptide type 1 receptor; Belongs to the G-protein coupled receptor 2 family.
    
 0.995
calcr
Calcitonin receptor; Belongs to the G-protein coupled receptor 2 family.
    
 0.995
LOC108276023
Calcitonin gene-related peptide type 1 receptor-like; Belongs to the G-protein coupled receptor 2 family.
    
 0.990
adm2
ADM2.
     
 0.977
adm
ADM isoform X2.
    
 0.976
ramp2
Receptor activity-modifying protein 2.
     
0.944
LOC108264181
ADM2-like.
     
 0.941
LOC108256701
Receptor activity-modifying protein 3-like.
     
0.936
IAPP
Islet amyloid polypeptide.
     
 0.935
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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