Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tex36Testis-expressed sequence 36 protein isoform X1. (148 aa)    
Predicted Functional Partners:
LOC108262753
Dual specificity testis-specific protein kinase 2-like.
      
 0.751
LOC108268280
Doublesex- and mab-3-related transcription factor 3-like.
      
 0.695
prrc1
Protein PRRC1.
      
 0.615
spdya
Speedy protein A isoform X2.
      
 0.615
tex10
Testis-expressed sequence 10 protein.
      
 0.602
spo11
Meiotic recombination protein SPO11 isoform X1.
      
 0.544
tex30
Testis-expressed sequence 30 protein isoform X2.
      
 0.544
ppp1r11
Protein phosphatase 1 regulatory subunit 11.
      
 0.541
dmc1
Meiotic recombination protein dmc1/lim15-like protein; Belongs to the RecA family.
      
 0.515
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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