Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
nhsl2LOW QUALITY PROTEIN: NHS-like protein 2. (923 aa)    
Predicted Functional Partners:
pick1
PRKCA-binding protein.
    
   0.964
tpt1
Translationally-controlled Tumor protein; Belongs to the TCTP family.
    
   0.964
brk1
Probable protein brick1.
    
 
 0.874
pin4
Peptidyl-prolyl cis-trans isomerase.
      
 0.758
nckap1
Nck-associated protein 1 isoform X3.
    
 
 0.748
wasf1
wiskott-Aldrich syndrome protein family member 1 isoform X1.
    
   0.694
wasf2
wiskott-Aldrich syndrome protein family member 2.
    
   0.694
LOC108268783
Proline-rich protein 5-like isoform X1.
      
 0.689
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 
 0.681
abi1
Abl interactor 1 isoform X1.
    
 
 0.657
Your Current Organism:
Ictalurus punctatus
NCBI taxonomy Id: 7998
Other names: I. punctatus, Silurus punctatus, channel catfish
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